miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Pseudoroegneria spicata



ABOUT THIS RECORD

ID: MNEST002271
species: Pseudoroegneria spicata
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTCTTCCTCTTCCTCTTCTC

miRNA*
GAAGAGAAGAGAAGAAAAG

mismatches: 3
bulges: 2

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pre-miRNA
ATTTCTTCCACCTCTCTTTCTTCTCTTCCTCTTCCTCTTCTCCGCTTCCGAACCTCTTCCTCCTCCGAGCGAGCTCTCCCAGAAGCAATCGAGCGAGCAG
CTTTCTTCTTCTTCTTCCTCCTCCTCTTCTTGGTCTTGGCGAGCAGGGAGGGGTGCTCGCACCAACTCTGCCGGCGGGCCGGACCGGGCAGGGGATAGGA
TCTGAAGAAGCTTCAGAGGCAAGACGATCGATCCATCTTGGGGTTGGAATCCTGTCGTGGTGATCGATCGAGCTCCATGATGAATGTGCTCTCCAGCGGC
AACCCCCAGAACCTGCGCATAATCCATCACCATCAACACGATATTTTATTATGTCCACGGCGGAGCAGCTCAGGCCAGCTCGCTGTCAACGCACATCCTC
CTAGCCTCACCCGCGCGAGGAGGCCTTCTTCTAGCTCCTTCCGCCGAGGCGCAGTCGTCGCCGTGAAAGCCGTCGCCGACGGCGGCGGCGAATCCAGCAG
CGGCAAAGACGACGACGACGACGACGATGAAGAGAAGAGAAGAAAAGATGACGAGGAGGGCATGT


dot-bracket secondary structure
......(((.((((((..((((.(((((.(((((.(((((..((.((((.((((((.........(((.((.((.(((...(((((....((((.....)
)))..((((((....((((..((((((.((((((((.(((..((..((((.((((....))))..))))....))..))))))))))).)))))).))))
...))))))))))).)))))....)).))).........))))))))))...((((((((((((.(((.((((..(((.....))).))))....(((.(
(............)))))...))).))))))....(((.((((...)))).)))((.((((((((.((((.(((((.((...........))...(((((
...((.......))..))))))))))......))))..)))))))).))((..(((((((((((....(((((((((...)))))))))..........)
))))...))))))..)))))))).))..))))))))))))))).)))).)).)))).))).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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